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Why are so many young people getting cancer? What the data say

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Of the many young people whom Cathy Eng has treated for cancer, the person who stood out the most was a young woman with a 65-year-old’s disease. The 16-year-old had flown from China to Texas to receive treatment for a gastrointestinal cancer that typically occurs in older adults. Her parents had sold their house to fund her care, but it was already too late. “She had such advanced disease, there was not much that I could do,” says Eng, now an oncologist at Vanderbilt University Medical Center in Nashville, Tennessee.

Eng specializes in adult cancers. And although the teenager, who she saw about a decade ago, was Eng’s youngest patient, she was hardly the only one to seem too young and healthy for the kind of cancer that she had.

Thousands of miles away, in Mumbai, India, surgeon George Barreto had been noticing the same thing. The observations quickly became personal, he says. Friends and family members were also developing improbable forms of cancer. “And then I made a mistake people should never do,” says Barreto, now at Flinders University in Adelaide, Australia. “I promised them I would get to the bottom of this.”

It took years to make headway on that promise, as oncologists such as Barreto and Eng gathered hard data. Statistics from around the world are now clear: the rates of more than a dozen cancers are increasing among adults under the age of 50. This rise varies from country to country and cancer to cancer, but models based on global data predict that the number of early-onset cancer cases will increase by around 30% between 2019 and 20301. In the United States, colorectal cancer — which typically strikes men in their mid-60s or older — has become the leading cause of cancer death among men under 502. In young women, it has become the second leading cause of cancer death.

As calls mount for better screening, awareness and treatments, investigators are scrambling to explain why rates are increasing. The most likely contributors — such as rising rates of obesity and early-cancer screening — do not fully account for the increase. Some are searching for answers in the gut microbiome or in the genomes of tumours themselves. But many think that the answers are still buried in studies that have tracked the lives and health of children born half a century ago. “If it had been a single smoking gun, our studies would have at least pointed to one factor,” says Sonia Kupfer, a gastroenterologist at the University of Chicago in Illinois. “But it doesn’t seem to be that — it seems to be a combination of many different factors.”

On the increase

In some countries, including the United States, deaths owing to cancer are declining thanks to increased screening, decreasing rates of smoking and new treatment options. Globally, however, cancer is on the rise (see ‘Rising rates’). Early-onset cancers — often defined as those that occur in adults under the age of 50 — still account for only a fraction of the total cases, but the incidence rate has been growing. This rise, coupled with an increase in global population, means that the number of deaths from early-onset cancers has risen by nearly 28% between 1990 and 2019 worldwide. Models also suggest that mortality could climb1.

Rising rates. Two lines charts showing incidence and death rates of early-onset cancer.

Source: Ref. 1

Often, these early-onset cancers affect the digestive system, with some of the sharpest increases in rates of colorectal, pancreatic and stomach cancer. Globally, colorectal cancer is one of the most common cancers and tends to draw the most attention. But others — including breast and prostate cancers — are also on the rise.

In the United States, where data on cancer incidence is particularly rigorous, uterine cancer has increased by 2% each year since the mid-1990s among adults younger than 502. Early-onset breast cancer increased by 3.8% per year between 2016 and 20193.

The rate of cancer among young adults in the United States has increased faster in women than in men, and in Hispanic people faster than in non-Hispanic white people. Colorectal cancer rates in young people are rising faster in American Indian and Alaska Native people than they are in white people (see ‘Health disparities’). And Black people with early onset colorectal cancer are more likely to be diagnosed younger and at a more advanced stage than are white people. “It is likely that social determinants of health are playing a role in early-onset cancer disparities,” says Kupfer. Such determinants include access to healthy foods, lifestyle factors and systemic racism.

Health disparities. Line chart showing how incidence of colorectal cancer has increased among indigenous people.

Source: Ref. 4

Cancer’s shift to younger demographics has driven a push for earlier screening. Advocates have been promoting events targeted at the under 50s. And high-profile cases — such as the 2020 death of actor Chadwick Boseman from colon cancer at the age of 43 — have helped to raise awareness. In 2018, the American Cancer Society urged people to be screened for colorectal cancer starting at age 45, rather than the previous recommendation of 50.

In Alaska, health leaders serving Alaska Native people have been recommending even earlier screening — at age 40 — since 2013. But the barriers to screening are high; many communities are inaccessible by road, and some people have to charter a plane to reach a facility in which they can have a colonoscopy. “If the weather’s bad, you could be there a week,” says Diana Redwood, an epidemiologist at the Alaska Native Tribal Health Consortium in Anchorage.

These efforts have paid off to some extent: screening rates in the community have more than doubled over the past three decades, and now exceed those of state residents who are not Alaska Natives. But mortality from colorectal cancer has not budged, says Redwood. Although colorectal cancer rates are falling in people over 50 years old, the age group that is still most likely to be screened, the rates in younger Alaska Native people are climbing by 5.2% each year4.

Genetic clues

The prominence of gastrointestinal cancers and the coincidence with dietary changes in many countries point to the rising rates of obesity and diets rich in processed foods as likely culprits in contributing to rising case rates. But statistical analyses suggest that these factors are not enough to explain the full picture, says Daniel Huang, a hepatologist at the National University of Singapore. “Many have hypothesized that things like obesity and alcohol consumption might explain some of our findings,” he says. “But it looks like you need a deeper dive into the data.”

Those analyses match the anecdotal experiences that clinicians described to Nature: often, the young people they treat were fit and seemingly healthy, with few cancer risk factors. One 32-year-old woman that Eng treated was preparing for a marathon. Previous physicians had dismissed the blood in her stool as irritable bowel syndrome caused by intense training. “She was healthy as can be,” says Eng. “If you looked at her, you would have no idea that more than half of her liver was tumour.”

Prominent cancer-research funders, including the US National Cancer Institute and Cancer Research UK, have supported programmes to find other contributors to early-onset cancer. One approach has been to look for genetic clues in early-onset tumours that might set them apart from tumours in older adults. Pathologist Shuji Ogino at Harvard Medical School in Boston, Massachusetts, and his colleagues have found some possible characteristics of aggressive tumours in early-onset cancers. For example, aggressive tumours are sometimes particularly adept at suppressing the body’s immune responses to cancer, and Ogino’s team has found signs of a muted immune response to some early-onset tumours5.

But these differences are subtle, he says, and researchers have yet to find a clear demarcation between early-onset and later-onset cancers. “It’s not dichotomous, but more like a continuum,” he says.

Researchers have also looked at the microorganisms that reside in the human body. Disruptions in microbiome composition, such as those caused by dietary changes or antibiotics, have been linked to inflammation and increased risk of several diseases, including some forms of cancer. Whether there is a link between the microbiome and early-onset cancers is still in question: results so far are still preliminary and it’s difficult to gather long-term data, says Christopher Lieu, an oncologist at the University of Colorado Cancer Center in Aurora. “The list of things that impact the microbiome is so extensive,” he says. “You’re asking people to recall what they ate as kids, and I can barely remember what I ate for breakfast.”

Looking to the past

But increasing the size of studies could help. Eng is developing a project to look at possible correlations between microbiome composition and the onset of cancer at a young age, and she plans to combine her data with those from collaborators in Africa, Europe and South America. Because the number of early-onset cancer cases is still relatively small at any one centre, this kind of international coordination is important to give statistical analyses more power, says Kimmie Ng, founding director of the Young-Onset Colorectal Cancer Center at the Dana-Farber Cancer Institute in Boston.

Another approach is to scrutinize the differences between countries. For example, Japan and South Korea are located near one another and are similar economically. But early-onset colorectal cancer is increasing at a faster rate in South Korea than it is in Japan, says Tomotaka Ugai, a cancer epidemiologist at Harvard Medical School. Ugai and his collaborators hope to determine why.

But data are scarce in some countries. In South Africa, cancer data are collected only from the 16% of the population that has medical insurance, says Boitumelo Ramasodi, regional director for Southern Africa at the Global Colon Cancer Association, a non-profit organization in Washington DC. Those who do not have insurance are not counted. And families rarely keep records of who has died of cancer, she says. For many Black people in the country, cancer is considered a white person’s disease; Ramasodi initially struggled to make sense of her own diagnosis of colorectal cancer at the age of 44. “Black people don’t get cancer,” she thought at the time. “I’m young, I’m Black, why do I have cancer?”

Ultimately, researchers will also have to look back in time for clues to understand rising early-onset cancers, says epidemiologist Barbara Cohn at the Public Health Institute in Oakland, California. Research has shown that cancers can arise many years after an exposure to a carcinogen, such as asbestos or cigarette smoke. “If the latent period is decades, then where do you look?” she says. “We believe that you need to look as early as possible in life to understand this.”

To do that, researchers will need 40–60 years of data, collected from thousands of people — enough to capture a sufficient number of early-onset cancers. Cohn directs an unusual repository of data and blood samples that have been collected from about 20,000 expectant mothers during pregnancy since 1959. Researchers have followed many of the original participants, and their children, since then.

Cohn and Caitlin Murphy, an epidemiologist at the University of Texas Health Science Center at Houston, have already tried combing through the data to look for ties to early-onset cancers, and have found a possible association between early colorectal cancer and prenatal exposure to a particular synthetic form of progesterone, sometimes taken to prevent premature labour6. But the study must be repeated in other cohorts for investigators to be sure.

More informed

Finding studies that follow cohorts from the prenatal stage to adulthood is a challenge. The ideal study would enrol thousands of expectant mothers in several countries, collect data and samples of blood, saliva and urine, and then track them for decades, says Ogino. A team funded by Cancer Research UK, the US National Cancer Institute and others will analyse data from the United States, Mexico and several European countries, to look for environmental exposures and other possible influences on early-onset cancer risk. Murphy and Cohn also hope to incorporate data collected from fathers and are working with collaborators to analyse blood samples in search of more chemicals that offspring might have encountered in the womb.

Murphy expects the results to be complicated. “At first, I really believed that there was something unique about early-onset colorectal cancers compared to older adults, and a risk factor out there that explains everything,” she says. “The more time I’ve spent, the more it seems clear that there’s not just one particular thing, it’s a bunch of risk factors.”

For now, it’s important for physicians to share their data on early-onset cancers and to follow their patients even after they complete their therapy, to learn more about how best to treat them, says Irit Ben-Aharon, an oncologist at the Rambam Health Care Campus in Haifa, Israel. Cancer treatment in young people can be fraught: some cancer drugs can cause cardiovascular problems or even secondary cancers years after treatment — a risk that becomes more concerning in a young person, she says.

Young adults might also be pregnant at the time of diagnosis, or more concerned about the impact of cancer drugs on their fertility than are people who are past their reproductive years. And they are less likely to be retired, and more likely to be concerned about whether their cancer treatment will cause long-term cognitive damage that could hinder their ability to work.

When Candace Henley was diagnosed with colorectal cancer at the age of 35, she was a single mother raising five children. The aggressive surgery she received rendered her unable to continue in her job as a bus driver, and the family was soon homeless. “I didn’t know what questions to ask and so the decisions around treatment were made for me,” says Henley, who went on to found The Blue Hat Foundation for Colorectal Cancer Awareness in Chicago, Illinois. “No one unfortunately considered what my needs were at home.”

In the years since Eng first noticed how young her patients were, certain things have changed. Some advocacy groups have begun targeting their information campaigns at younger audiences. People with early-onset cancers are more informed now and seek out second opinions when physicians dismiss their symptoms, Eng says. This could mean that physicians will more often catch early-onset cancers before they have spread and become more difficult to treat.

But Barreto still doesn’t have all the answers he promised. He wants to study the impact of prenatal stresses, such as exposure to alcohol and cigarette smoke or malnourishment, on early-cancer risk. He’s contacted scientists around the world, but no biobanking projects contain the data and samples that he requires.

If all of the data he and others need aren’t available now, it’s understandable, he says. “We never saw this coming. But in 20 years if we don’t have databases to record this, it’s our failure. It’s negligence.”

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These super stylish designer wireless speakers by Elac have HDMI and a phono stage for your turntable, too

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Many of the best wireless speakers are functional, designed with only their audio performance in mind. But others are designed to be looked at as well as listened too. That’s definitely the case for the rather beautiful speakers pictured above, the Adsum and Elac Debut ConneX DCB41 speakers. 

The rather clunky name is because these speakers are a partnership between the German high-end audio brand Elac and the Brooklyn fashion house Adsum. The speakers are based on Elac’s award-winning powered bookshelf speakers, the Debut ConneX – and in this edition they’ve been supplemented with custom magnetic speaker screens, a custom one-piece metal stand and a custom speaker box and controller. They’re also the only fully painted model of the speakers you can buy.

Adsum and Elac Debut Connex DCB41 Speakers: substance as well as style

The Adsum and Elac Debut ConneX DCB41 Speakers

(Image credit: Elac; Adsum)

Of course, there’s no point in having pretty speakers if they don’t deliver on the audio front. But this pair should. They boast twin 50W Class D amplifiers, and there’s support for a wide range of audio sources including Bluetooth (aptX), HDMI ARC, Analog/Phono, Optical and USB (High-Res 96Khz 24-bit for Mac/Windows). In a nice touch there’s a built-in phono stage so you can connect one of the best turntables directly without first having to put it through a separate phono stage.

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Being a parent is a hidden scientific superpower — here’s why

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Lindsey Smith Taillie and daughter walking seaside near hills while spotting puffins in Runde, Norway, June 2023

Being a parent is often seen as a career obstacle, but it can actually make you a better scientist, says nutrition epidemiologist Lindsey Smith Taillie.Credit: Paul Taillie

More than once in the past few years, in a variety of informal settings, I’ve overheard senior scientists recommend hiring people without children over those who are parents. Their reasoning, I gather, is that a parent might be smart and well-trained, but wouldn’t have the time or dedication to cut it in research. As a mid-career scientist with two young children, these comments floored me.

In my experience, these assumptions, typically aimed at faculty members or postdocs, are all too frequent. And although people tend to phrase their concerns in a gender-neutral way, about ‘parents’, they’re almost always talking about women. Women, who comprise only 33% of full professors despite accounting for more than 50% of the PhDs awarded each year, and who consistently have lower salaries than men across all ranks. Women, who still disproportionately do the bulk of domestic work, including childcare, around the globe. Although I’ve heard these comments more often from men, I’ve also heard female scientists essentially dismiss someone if they become pregnant, as if their career is over before really getting started.

It’s true that being an academic woman with children is hard. In my field of global nutrition, it’s very common to have meetings at odd hours or need to travel at short notice. Dealing with school closures and frequent illnesses feels similar to playing whack-a-mole, needing to keep research moving while juggling childcare.

I have benefited from being white, heterosexual, married, neurotypical and working at a prestigious university. Crucially, I also benefit from having a husband, also a scientist, who does at least half of the childcare, cooking and cleaning, something that I think is still rare in heterosexual co-parenting relationships. Still, even with all of this privilege, it’s hard: there are many days when my brain feels shattered.

But, becoming a parent has also undoubtedly helped my career; both my rate of publishing and my number of grants won have increased substantially since my first daughter was born in 2017. I’ve become a more productive scientist. Here’s why.

Time scarcity

Those senior scientists who say that parents have less time are probably right: before I had children, I worked longer hours. I would go down rabbit holes into the early evening and often on weekends. I felt like I was always working and filling up all of my available time with research. But now, I write e-mails, papers and grant drafts like I am taking an exam: with intense focus and high speed. Having time constraints has forced me into a mindset of relentless prioritization, which has increased my scientific acumen and decision-making.

For example, last December, I was asked to present my research at a US Senate committee hearing on type 2 diabetes. I had only four days to put together a written testimony summarizing decades of data and build a case for why nutrition matters in diabetes prevention. My husband was out of town and, in a cruel twist of fate, one of my children got a throat infection. It was stressful, but I was able to draft the entire testimony in a single workday — something that, before having children, would have easily taken the entire four days. Also, because I knew that I’d need to rush off any second to tend to my sick child, I was able to push through my anxiety about writing such an important document and focus on getting pen to paper.

Arguably, you could achieve this effect without children by having stronger work–life boundaries. That’s great, but it never worked for me. Having a non-negotiable deadline of school or day-care pick-up forced me to let go of my perfectionist tendencies, supercharging my productivity.

A fresh perspective

Becoming a parent also gave me a first-hand perspective on my field of nutrition. For example, similar to most young children, my three- and six-year-olds are picky eaters, and it’s been a challenge for me to get them to try new foods and eat veggies while also keeping food waste to a minimum. From social media, I discovered that giving my daughters tiny portions presented in a cute way — for example, a single broccoli floret with a toothpick and dip or a few spoons of soup in a colourful cupcake tin — helped with this. These experiences with my own children have helped me to incorporate families’ perspectives into my research design and to test interventions to prevent household food waste, increasing the chances that our interventions will be more effective for more people.

Parent networks

Even more importantly, becoming a parent has allowed me to create networks. I collaborate with colleagues who are also parents, and sharing our experiences has helped us to become friends, able to empathize and help each other out in a pinch, with work or with parenting.

Lindsey Smith Taillie swimming in a cenote in Merida, Mexico, on December 2023 with her husband and two children.

Lindsey Smith Taillie’s experiences as a mother have helped to improve her food-waste intervention designs.Credit: Hacienda Mucuyche

This network has extended far beyond my immediate colleagues, too. Through the social-media platform Facebook, I have found an online community of academic mothers, which has become a treasure trove of help and advice. More than just tips on sippy cups or football clubs, people in the group share the hidden rules of playing the academic game, from handling job searches as a couple of two academics to going up for tenure or accepting tough grant reviews.

The networking benefits of parenthood translate to the team science, too. Sharing experiences about children helps to build rapport with collaborators — we’re able to bond over our common scientific challenges and laugh about our children’s silly stunts.

Emotional intelligence

Parenting has also made me a more effective teacher. For example, because my older daughter is obsessed with mythical creatures, I’m the proud owner of a giant inflatable pink unicorn costume — something that I have worn in class to demonstrate the power of food marketing, when discussing the Starbucks pink unicorn frappuccinos. It was silly, but that silliness has been helpful for connecting with students. Beyond pink unicorns, telling stories about my children in the classroom has made me more relatable and helped me to show key points about nutrition by invoking real-world examples. Parenting has helped me to expand my horizons and relate more to my students.

Being a parent has made me a better mentor, more able to support students who have children and helping me to treat all students as whole people, with a life outside science — whether or not that includes children. Because of my own experience, I feel better equipped to help my students to integrate the facets of their lives and find what balance looks like for them. It’s been difficult to speak out publicly about both the challenges and merits of parenting as a scientist. When I push back against things such as out-of-hours meetings, I worry about increasing biases against parents and especially mothers, perpetuating challenges to hiring and retaining them in the scientific workforce. But as time goes on, and I see these biases persist, I think that now is the time to speak up and be clear. Parenting isn’t my scientific kryptonite; it’s my superpower.

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Want to see what an Exaflop supercomputer looks like (and how it is cooled)? Check out this video of Aurora, the world’s second most powerful HPC ever

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Few people will ever get to see inside a supercomputer for real, but it is possible to take a virtual tour. Nvidia previously opened the doors to Eos, one of the world’s fastest supercomputers, and now Department of Energy’s Argon National Laboratory has prepared a short 5-minute video guiding viewers through Aurora, its exascale supercomputer.

Aurora is already one of the fastest supercomputers in the world. HPC Wire ranked it number #2 in its top 500 list in November 2023. But that ranking was achieved with just “half of Aurora running the HPL benchmark”.

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Blueprinting extendable nanomaterials with standardized protein blocks

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Natural and previously designed proteins exhibit a wide range of helical geometries with local irregularities, kinks and deviations from linearity16 that make it difficult to achieve the properties illustrated in Fig. 1 that enable simple nanomaterial scaling (beyond the one dimension accessed by varying the number of repeats in a repeat protein or coiled coil). To achieve these properties, we designed a series of new building blocks constructed from ideal α-helices with all helical axes aligned. Restricting helical geometry to ideal straight helices with zero helical twist in principle considerably limits what types of structure could be built, but this is more than compensated by the great simplification of downstream material design, as illustrated below. We construct twistless helix repeat (THR) protein blocks from identical straight α-helices (typically 2–4 helices in each unit); the length of the blocks can be varied simply by varying the number of repeat units. In contrast to existing natural and designed repeat proteins17, THRs are constructed to enable modular nanomaterial design: linear blocks are perfectly straight, allowing nanomaterials to be extended and contracted with no alteration in the angles between the constituent monomers; curve blocks have smoothly curving trajectories that stay in-plane; and turn as well as interaction modules enable placement of two blocks in precise relative orientations with angles appropriate for regular material design.

We blueprint THRs by explicit placement of these straight helix structural elements using an extension of the principles used in coiled-coil and helical bundle design16,18. A first helix a0, part of the zeroth repeat, is placed at the origin and aligned to the z axis. A copy of a0 called a1 is then placed at a new location to set the rigid body transformation between the zeroth and first (and all subsequent) repeat units. After this, any other helices (b0, c0 …) that will be part of the repeating unit are placed as appropriate between a0 and a1 to provide more helices to pack against for stability, and the helices are connected with loops19; repetition of this basic unit then generates backbones with the desired geometries17 (Fig. 1b,c). As the helices are perfectly straight and parallel to the z axis, the overall repeat protein trajectory is fully defined by the following transformation parameters from a0 to a1: the distance of displacement in the xy plane from helical axis to helical axis (d), the change in displacement in the z axis direction (Δh) and the change in helix phase (Δθ; Fig. 1b). The remaining degrees of freedom for the positions of helices b0, c0 …, which define the internal geometry of the repeat, are extensively sampled, sequences are designed using Rosetta FastDesign or ProteinMPNN19,20, and designs are selected for experimental characterization on the basis of packing and sequence–structure consistency metrics (Methods). We obtained synthetic genes encoding the selected designs, expressed them in Escherichia coli and purified the proteins using nickel–nitrilotriacetic acid immobilized metal affinity chromatography. Designs that were solubly expressed were analysed by size-exclusion chromatography (SEC) to determine oligomerization state, and in the case of assemblies a subset was analysed by negative-stain electron microscopy (ns-EM). Experimental success rates and structural homogeneity for different classes of designs are summarized in Supplementary Figs. 1 and 2 and Supplementary Discussion.

To generate straight, linear THRs, we set Δθ to zero. As illustrated in Fig. 2a,b, this results in perfectly straight repeat proteins in which each repeat unit is translated but not rotated relative to the previous unit. There are two subclasses: setting Δh = 0 generates repeat proteins with each repeat unit simply displaced in the xy plane (Fig. 2a), whereas setting Δh to a non-zero value generates repeat proteins that also step along the z axis (Fig. 2b). We tested 33 linear THRs (with Δh = 0) with helices either about 20 or about 40 residues in height; 23 of 33 tested designs were solubly expressed, and 13 of 19 designs analysed by SEC were primarily monomeric as designed (Supplementary Figs. 1a,b and 2). Structural characterization of the linear building blocks by X-ray crystallography individually and/or cryogenic EM (cryo-EM) in the context of assemblies (see below) revealed that both the detailed internal structures and the overall straight linear geometry were successfully achieved. The backbone root mean square deviations (RMSDs) between the design models and crystal structures of three 20-residue helix designs (THR1, THR2 and THR3) and two 40-residue helix designs (THR5 and THR6) were 0.8, 0.8, 0.4, 0.6 and 1.3 Å, respectively, and in all five cases the relative rotation of successive repeats is nearly zero (Fig. 2a and Supplementary Fig. 6a). We found that we could not only control Δθ = 0, but also program values of the inter-repeat distance d: the crystal structure of a design with d set to a compact helix packing value of 8.7 Å had a very close value of 8.6–8.8 Å at its central interior (THR3), in contrast to most others designed at 10.0 Å (Supplementary Fig. 6b). For structural validation of blocks with non-zero Δh, the cryo-EM structure of an assembly constructed from such a block (THR4) exhibited a linear stair-stepping structure nearly identical to the design model, (backbone RMSD of 1.0 Å; Fig. 2b and Supplementary Fig. 1a).

Fig. 2: 1D and 2D shapes from THRs.
figure 2

a,b, The linear THR designs (rainbow) are nearly identical to the experimentally determined structures (grey). Side-chain sticks between α-carbon and β-carbon are shown to indicate helical phasing. a, Left: the 2.5-Å-resolution crystal structure of the short, linear THR1 has a 0.8 Å CA RMSD to the design. The inset below shows repeat packing in the THR interior. Right: the 2.7-Å-resolution crystal structure of the tall, linear THR5 has a 0.6 Å CA RMSD to the design. b, Bottom: Comparison of the stair-stepping linear THR4 design model to the cryo-EM structure (determined as part of a nanocage assembly; Supplementary Fig. 16). The CA RMSD between the cryo-EM structure and the design model is 1.0 Å. c, C4 and C3 polygons generated from four-helix turn module THRs as illustrated on the left. C4 square 90_C4_B (middle) and C3 triangle 120_C3_A (right) oligomers with representative ns-EM 2D class averages for comparison (raw EM micrographs are in Supplementary Fig. 1f). Chain breaks are at the ends of the rainbow sections. Scale bar, 4 nm (for the design models); class averages are not to scale. d, Uncapped curve THRs generate cyclic ring oligomers. The 12-repeat ring design (tested as C4) R12B has a cryo-EM 3D reconstruction overlaid on the model; the two are nearly identical. A 2D class average with the individual straight helices resolved is shown left of the ring. e, The 20-repeat ring design (tested as C4) R20A has an ns-EM reconstruction density overlaid on the model, and a raw micrograph is shown inside. Scale bar, 10 nm. f, The 30-repeat ring design (tested as C6) R30A represented in a similar manner to e. Scale bar in e, 10 nm (for the design models with reconstruction maps overlaid in df); class averages are not to scale. The asymmetric unit is coloured in rainbow.

To generate turn blocks, we blueprint an additional helix c0 lined up with a0 and a1 that can be assigned any specified phase difference, which can be utilized in fusion operations to produce a turn that is equal to θc − θa (Supplementary Fig. 5d,e). As for all of the THR blocks described here, because of the ideality of the block construction, the same sequence interactions can be used for the intra-block and inter-block interactions; we refer to blocks in which the terminal repeats have identical sequences to the internal repeats as uncapped, and those in which the terminal helices have polar outward-facing residues to prevent self-association (like the linear blocks above) as capped. We experimentally characterized uncapped turn modules that generate rotations of 360/n, in which n is 3, 4, 5 or 6; if the geometry is correct, these should oligomerize to form closed polygons with n subunits. ns-EM 2D class averages of the n = 3 designs clearly show the designed triangular shape with flattened corners (Fig. 2c and Supplementary Fig. 1f), and for n = 4, the designed square shapes (Fig. 2c and Supplementary Fig. 1f) including fine details such as the lower density around the corner helix are observed. For n = 5 and n = 6, success rates were lower, probably because their hinge regions involved less-extensive helix–helix interactions, but we did obtain designs with the expected polygonal structures for both after using reinforced corners on the C6 design (Supplementary Fig. 1f and Supplementary Discussion). Thus, by controlling the phase rotations between adjacent helices, turns can be encoded while maintaining overall parallel helical architecture. We also made polygonal designs with combinations of linear THRs and new straight helix-heterodimer corner junctions instead of turn modules (Supplementary Discussion and Supplementary Figs. 1g, 9 and 10).

To generate curve THRs, we incorporate a phase change (Δθ) between repeating elements (Fig. 1c) that generates a curved trajectory rather than a linear one. We choose Δθ to be a factor of 360° so that perfectly closed rings can be generated. The size of the closed ring can be controlled by specifying Δθ and the distance d between repeats (Supplementary Fig. 7). To access a broad range of d parameter values, we add additional helices to the repeat unit; for circular rings we used four helices per repeat unit. A full curve THR ring with n repeats can be divided into smaller chains each with m repeats, in which m is a factor of n; n/m uncapped repeats can associate to generate the full ring with cyclic symmetry21. To facilitate gene synthesis and protein production, we characterized such split oligomeric versions of the rings rather than synthesizing very long single chains. We designed rings with 12, 18, 20 and 30 repeats ranging from 9 to 22 nm in outside diameter. The 12- and 20-repeat rings were tested as C4 designs, whereas the 18- and 30-repeat rings were tested as C6 designs. Designs for all four ring sizes were remarkably uniform with ns-EM micrographs densely covered with circular assemblies with few to no defects or alternative structures present (Supplementary Fig. 7). Two-dimensional class averages showed that designs for all four sizes were close to the intended size (Fig. 2d; 10, 1 and 9 unique designs yielded distinct ring shapes for 18-, 20- and 30-repeat rings (Supplementary Figs. 1e and 2)). The smallest rings with 12 repeats have solvent-exposed helices exterior to the ring placed to facilitate outward-facing fusions without disrupting the core packing of the ring; these are clearly visible in the 2D class averages and 5.2-Å-resolution cryo-EM reconstruction of R12B (Fig. 2d and Supplementary Fig. 1e) that matches the designed patterning of the helices. ns-EM of the 18-, 20- and 30-repeat rings (with outside diameters of 12, 14 and 22 nm respectively) showed that many designs formed remarkably monodisperse populations of ring-like structures closely consistent with the design models (Fig. 2e,f and Supplementary Fig. 1e). ns-EM class averages of these designs had the smooth and round shape of the design models, and were in most but not all cases homogeneous (some designs assembled into closed-ring species that ranged by ±1 chain of the desired number, resulting in some slightly oblong shapes; Supplementary Fig. 1e). These designs highlight the control over ring curvature that can be achieved by specifying building block repeat rotation parameters.

The simplicity of our blocks in principle enables the reinforcing of designed materials using struts rigidly linking distinct structural elements. As a first test of this, we sought to build concentric ring assemblies from pairs of rings that have different sizes but repeat numbers that share large common denominators. For example, 2 repeat units of a 20-repeat ring can be combined with 3 repeat units of a 30-repeat ring as 10 copies generate a complete ring in both cases (Fig. 3a, left). Rings were segmented into matching cyclic symmetries, the rotation and z displacement of one ring relative to the other was sampled, and linear THRs were placed to connect the inner and outer rings. We constructed single-component C10 concentric ring assemblies by connecting a three-repeat-unit curved block and a two-repeat-unit curved block that both generate a 36° (360°/10) rotation with a radially oriented strut. Two-dimensional class averages of ns-EM images of the designed strutted assemblies show both rings clearly present (Fig. 3a, right; some 11-subunit rings were observed in addition to the target 10-subunit structure). We similarly connected three repeat units with a 20° rotation per repeat, and five repeat units with a 12° rotation per repeat, with a radial strut; the resulting composite subunits map out a 60° rotation of inner and outer rings such that six subunits generate a full 360° ring. The resulting two-component C6 strutted assembly yielded 2D class averages that showed both rings with all chains present, and a 5.1-Å cryo-EM reconstruction was very close to the design model (RMSD 2.7 Å) with very similar outer diameter (19.7 nm versus 20.1 nm; Fig. 3b and Supplementary Fig. 8c). The helix positioning in the inner ring and the strut are also very close to the design model (Supplementary Fig. 8c, insets). Thus, the modularity of the THRs enables designing complex structures by inspection, and enables buttressing to increase structural robustness (Supplementary Discussion and Supplementary Fig. 8).

Fig. 3: Design of strutted double rings.
figure 3

a,b, Two different size rings built from curve THRs for which integral multiples generate the same rotation can be concentrically nested and connected by struts. a, Three repeats of an outer ring (12° per repeat) are combined with two repeats of an inner ring (18° per repeat) that both generate a 36° rotation. Connection of the two pieces with a linear THR generates a C10 single-component ring (strut_C10_8); an asymmetric unit is highlighted in the second ring image. An ns-EM 3D reconstruction in C10 symmetry is shown overlaid with the design model next to 2D class averages and a representative micrograph. b, Five repeats of an outer ring (12° per repeat) are combined with three repeats of an inner ring (20° per repeat) that both generate a 60° rotation. Connection of the two pieces with a linear THR and an additional chain break in the outer ring generates a C6 two-component ring (strut_C6_21); an asymmetric unit is highlighted in the second ring image with the two chains in different colors. A cryo-EM 3D reconstruction in C6 symmetry is shown overlaid with the design model next to cryo-EM 2D class averages and a representative ns-EM micrograph (additional cryo-EM details are provided in Supplementary Fig. 8c). Scale bars, 20 nm (a,b). An asymmetric unit is outlined on top of the design model, and repeats are sectioned with dashed lines.

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Quordle today – hints and answers for Thursday, March 14 (game #780)

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It’s time for your daily dose of Quordle hints, plus the answers for both the main game and the Daily Sequence spin off. 

Quordle is the only one of the many Wordle clones that I’m still playing now, around two years after the daily-word-game craze hit the internet, and with good reason: it’s fun, but also difficult.

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Numbers highlight US dominance in clinical research

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As the leading country in health-sciences output in the Nature Index, the United States’ Share is almost 8,500, higher than the next 10 leading countries combined. As a result, US institutions feature prominently among the leading research organizations for the subject, with 30 of the top 50 being based there.

The country’s dominance means that it comes top for Share in all but seven of the journals tracked by the Nature Index in the subject. This includes large general journals such as Nature Communications and specialist medical publications such as The New England Journal of Medicine. PLOS Medicine and Gut are two examples where authors based elsewhere (the United Kingdom and China) made the largest contribution.

Proportion bar showing the leading five countries' Share and percentage of their contribution to health-sciences articles in 6 journals

Source: Nature Index. Data analysis by Aayush Kagathra. Infographic by Simon Baker, Bec Crew and Tanner Maxwell.

The United States is the clear frontrunner among the leading five countries for health-sciences research, with a Share almost four times higher than China, in second place. The United Kingdom is third, with a Share of almost 1,500, a higher placing than its fourth position overall in the Nature Index.

Bar graph showing the leading countries in health-sciences output by Share in 2022-23 in the Nature Index

Source: Nature Index. Data analysis by Aayush Kagathra. Infographic by Simon Baker, Bec Crew and Tanner Maxwell.

Out of the top 25 countries for health-sciences articles in the Nature Index, five nations have a Share that makes up at least 29% of their overall footprint in the database across all subjects. Denmark, whose research is boosted by the success of companies such as Novo Nordisk, has the highest ratio in this regard at almost 40%.

Bar graph showing five of 25 countries with the highest proportion of health-sciences output in the Nature Index

Source: Nature Index. Data analysis by Aayush Kagathra. Infographic by Simon Baker, Bec Crew and Tanner Maxwell.

As Harvard University, in Cambridge, Massachusetts, is the leading institution for high-quality health-sciences research, its involvement in the top institutional partnership in the field is no surprise. But its dominance does not extend to all the other leading collaborations, some of which involve institutions outside the United States.

Bar graph showing the leading global institutional collaborations in health sciences in the Nature Index for 2022-23

Source: Nature Index. Data analysis by Aayush Kagathra. Infographic by Simon Baker, Bec Crew and Tanner Maxwell.

The difference in Nature Index health-sciences output between the leading academic institution, Harvard University in Cambridge, Massachusetts, and other top institutions is a Share of more than 600. Compared with Harvard, most of the leading institutions also have a lower proportion of their overall Nature Index output in health sciences.

The University of Toronto in Canada and Johns Hopkins University in Baltimore, Maryland, are the only other academic institutions with a health-sciences Share of over 200. They also have a relatively strong focus on health sciences, with over 35% of their overall Nature Index research output in the subject area.

Scatter plot showing selected institutions' Share in health sciences vs their health-science article contribution to overall Share in the Nature Index for 2022-23

Source: Nature Index. Data analysis by Aayush Kagathra. Infographic by Simon Baker, Bec Crew and Tanner Maxwell.

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Millions of secrets and auth keys were leaked on GitHub last year

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Millions of secrets and authentication keys were leaked on GitHub in 2023, with the majority of developers not caring to revoke them even after being notified of the mishap, new research has claimed.

A report from GitGuardian, a project that helps developers secure their software development with automated secrets detection and remediation, claims that in 2023, GitHub users accidentally exposed 12.8 million secrets in more than 3 million public repositories. 

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researchers map organ in stunning detail

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The heart is the first organ to develop, but despite its importance, scientists know surprisingly little about exactly how its cells are arranged.

Now a team of researchers have combined RNA sequencing and cutting edge imaging technology to map the heart in more detail than ever before.

They hope that this ‘atlas’ will allow scientists to tackle congenital defects, which are a leading cause of death in infants.

Subscribe to Nature Briefing, an unmissable daily round-up of science news, opinion and analysis free in your inbox every weekday.

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Maingear launches gorgeous gaming PCs with even sleeker motherboard cable management

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Maingear announced its latest line of gaming PCs, which not only boasts a beautiful aesthetic but also feature truly unique: hidden motherboard cables.

The Zero series not only has one of the cleanest designs I’ve ever seen among the best gaming PCs, but it also uses MG-RC (Maingear Rear Connection) technology. It combines a stunning chassis interior through incredible cable management but also promotes optimal airflow and component upgrades that are much more simplified to make. 

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